Irene Otero-Muras: search on Z-Library

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1

La teoría de redes en ingeniería de control: aplicación al análisis dinámico y al control de procesos

Antelo, Luis T., Otero-Muras, Irene, Banga, Julio R., Alonso, Antonio A.

Journal:

Revista Iberoamericana de Automática e Informática Industrial RIAI

Year:

2007

Language:

spanish

File:

PDF, 476 KB

spanish, 2007

2

Advances in Chemical Reaction Network Theory for the Identification of Kinetic Models

Otero-Muras, Irene, Yordanov, Pencho, Stelling, Jörg

Journal:

IFAC Proceedings Volumes

Year:

2012

Language:

english

File:

PDF, 1.65 MB

english, 2012

3

Routes to Multiple Equilibria for Mass-Action Kinetic Systems

Alonso, Antonio A., Otero-Muras, Irene, Pájaro, Manuel

Journal:

Year:

2018

Language:

english

File:

PDF, 2.02 MB

english, 2018

4

Mixed Integer Multiobjective Optimization Approaches for Systems and Synthetic Biology

Otero-Muras, Irene, Banga, Julio R.

Journal:

IFAC-PapersOnLine

Year:

2018

Language:

english

File:

PDF, 516 KB

english, 2018

5

CRNT4SBML: a Python package for the detection of bistability in biochemical reaction networks

Reyes, Brandon C, Otero-Muras, Irene, Shuen, Michael T, Tartakovsky, Alexandre B, Petyuk, Vladislav A, Xu, Jinbo

Journal:

Year:

2020

File:

PDF, 283 KB

2020

6

Exploring multiplicity conditions in enzymatic reaction networks

Irene Otero-Muras, Julio R. Banga, Antonio A. Alonso

Journal:

Biotechnology Progress

Year:

2009

Language:

english

File:

PDF, 299 KB

english, 2009

7

A systematic approach to plant-wide control based on thermodynamics

Luis T. Antelo, Irene Otero-Muras, Julio R. Banga, Antonio A. Alonso

Journal:

Computers & Chemical Engineering

Year:

2007

Language:

english

File:

PDF, 1.58 MB

english, 2007

8

Dynamic analysis and control of biochemical reaction networks

Irene Otero-Muras, Gábor Szederkényi, Katalin M. Hangos, Antonio A. Alonso

Journal:

Mathematics and Computers in Simulation

Year:

2008

Language:

english

File:

PDF, 602 KB

english, 2008

9

Local dissipative Hamiltonian description of reversible reaction networks

Irene Otero-Muras, Gábor Szederkényi, Antonio A. Alonso, Katalin M. Hangos

Journal:

Systems & Control Letters

Year:

2008

Language:

english

File:

PDF, 488 KB

english, 2008

10

Contributing to fisheries sustainability by making the best possible use of their resources: the BEFAIR initiative

Antonio A. Alonso, Luis T. Antelo, Irene Otero-Muras, Raúl Pérez-Gálvez

Journal:

Trends in Food Science & Technology

Year:

2010

Language:

english

File:

PDF, 695 KB

english, 2010

11

Improved Optimization Methods for the Multiobjective Design of Bioprocesses

Sendín, José-Oscar H., Otero-Muras, Irene, Alonso, Antonio A., Banga, Julio R.

Journal:

Industrial & Engineering Chemistry Research

Year:

2006

Language:

english

File:

PDF, 510 KB

english, 2006

12

A method for inverse bifurcation of biochemical switches: inferring parameters from dose response curves

Otero-Muras, Irene, Yordanov, Pencho, Stelling, Joerg

Journal:

BMC Systems Biology

Year:

2014

Language:

english

File:

PDF, 8.51 MB

english, 2014

13

Multicriteria global optimization for biocircuit design

Otero-Muras, Irene, Banga, Julio R

Journal:

BMC Systems Biology

Year:

2014

Language:

english

File:

PDF, 979 KB

english, 2014

14

DYNAMIC ANALYSIS AND CONTROL OF CHEMICAL AND BIOCHEMICAL REACTION NETWORKS

Otero-Muras, Irene, Szederkényi, Gábor, Alonso, Antonio A., Hangos, Katalin M.

Journal:

IFAC Proceedings Volumes

Year:

2006

Language:

english

File:

PDF, 332 KB

english, 2006

15

A FORMAL FRAMEWORK FOR MULTIPLICITY DETECTION AND ITS IMPLICATIONS IN ROBUST CONTROL OF BIOCHEMICAL NETWORKS

Otero-Muras, Irene, Alonso, Antonio A., Banga, Julio R.

Journal:

IFAC Proceedings Volumes

Year:

2007

Language:

english

File:

PDF, 1.30 MB

english, 2007

16

Inducing sustained oscillations in mass action kinetic networks of a certain class

Otero-Muras, Irene, Szederkényi, Gábor, Alonso, Antonio A., Hangos, Katalin M.

Journal:

IFAC Proceedings Volumes

Year:

2012

Language:

english

File:

PDF, 1.09 MB

english, 2012

17

Parametric Condition for Multistationarity in Biochemical Reaction Networks*

Otero-Muras, Irene, Banga, Julio R., Alonso, Antonio A.

Journal:

IFAC Proceedings Volumes

Year:

2010

Language:

english

File:

PDF, 333 KB

english, 2010

18

SYNBADm: a tool for Optimization-based Automated Design of Synthetic Gene Circuits

Otero-Muras, Irene, Henriques, David, Banga, Julio R.

Journal:

Year:

2016

Language:

english

File:

PDF, 202 KB

english, 2016

19

Exploring Design Principles of Gene Regulatory Networks via Pareto Optimality**We acknowledge funding from the Spanish MINECO (and the European Regional Development Fund) project SYNBIOFACTORY (grant number DPI2014-55276-C5-2-R).

Otero-Muras, Irene, Banga, Julio R.

Journal:

IFAC-PapersOnLine

Year:

2016

Language:

english

File:

PDF, 440 KB

english, 2016

20

Feasible Equilibrium in Kinetic Systems**This work received partial financial support through grants PIE201230E042 and Salvador de Madariaga (PR2011-0363) and PIE 201230E042.

Alonso, Antonio A., Otero-Muras, Irene

Journal:

IFAC-PapersOnLine

Year:

2016

Language:

english

File:

PDF, 424 KB

english, 2016

21

Stochastic modeling and numerical simulation of gene regulatory networks with protein bursting

Pájaro, Manuel, Alonso, Antonio A., Otero-Muras, Irene, Vázquez, Carlos

Journal:

Journal of Theoretical Biology

Year:

2017

Language:

english

File:

PDF, 11.88 MB

english, 2017

22

Automated Design Framework for Synthetic Biology Exploiting Pareto Optimality

Otero-Muras, Irene, Banga, Julio R.

Journal:

ACS Synthetic Biology

Year:

2017

Language:

english

File:

PDF, 20.42 MB

english, 2017

23

SELANSI: a toolbox for Simulation of Stochastic Gene Regulatory Networks

Pájaro, Manuel, Otero-Muras, Irene, Vázquez, Carlos, Alonso, Antonio A

Journal:

Year:

2017

Language:

english

File:

PDF, 438 KB

english, 2017

24

Wegscheider’s condition and passivity of open chemical reaction systems 1 1This work received partial financial support through PIE 201230E042 and AGL2015-67504-C3-2-R

Alonso, Antonio A., Otero-Muras, Irene

Journal:

IFAC-PapersOnLine

Year:

2017

Language:

english

File:

PDF, 502 KB

english, 2017

25

Characterizing Multistationarity Regimes in Biochemical Reaction Networks

Otero-Muras, Irene, Banga, Julio R., Alonso, Antonio A., Jaeger, Johannes

Journal:

Year:

2012

Language:

english

File:

PDF, 885 KB

english, 2012

26

Design Principles of Biological Oscillators through Optimization: Forward and Reverse Analysis

Otero-Muras, Irene, Banga, Julio R., Poyatos, Juan F.

Journal:

Year:

2016

Language:

english

File:

PDF, 3.22 MB

english, 2016

27

Multistability in a prion replication interconnected cell reaction network

Méndez-González, J.M., Otero-Muras, Irene

Journal:

IFAC-PapersOnLine

Year:

2018

Language:

english

File:

PDF, 371 KB

english, 2018

28

Efficient simulation of stochastic gene regulatory networks

Pájaro, Manuel, Otero-Muras, Irene, Vázquez, Carlos, Alonso, Antonio A.

Journal:

IFAC-PapersOnLine

Year:

2018

Language:

english

File:

PDF, 742 KB

english, 2018

29

Distilling Robust Design Principles of Biocircuits Using Mixed Integer Dynamic Optimization

Otero-Muras, Irene, Banga, Julio

Journal:

Year:

2019

Language:

english

File:

PDF, 748 KB

english, 2019

30

Optimization-based prediction of fold bifurcations in nonlinear ODE models

Otero-Muras, Irene, Banga, Julio R.

Journal:

IFAC-PapersOnLine

Year:

2018

Language:

english

File:

PDF, 564 KB

english, 2018

31

BioSwitch: a tool for the detection of bistability and multi-steady state behaviour in signaling and gene regulatory networks

Yordanov, Pencho, Stelling, Joerg, Otero-Muras, Irene, Valencia, Alfonso

Journal:

Year:

2019

Language:

english

File:

PDF, 198 KB

english, 2019

32

Multiobjective optimization of gene circuits for metabolic engineering

Otero-Muras, Irene, Mannan, Ahmad A., Banga, Julio R., Oyarzún, Diego A.

Journal:

IFAC-PapersOnLine

Year:

2019

File:

PDF, 678 KB

2019

33

Solving the Competitive Binding Equilibria Between Many Ligands: Application to High-Throughput Screening and Affinity Optimization

Blay, Vincent, Otero-Muras, Irene, Annis, David Allen

Journal:

Analytical Chemistry

Year:

2020

File:

PDF, 621 KB

2020